Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.61□□□□□ -0.07
TMEM238C9JI98 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM238C9JI98 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM238C9JI98 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM238C9JI98 MST1L-201ENST00000442552 2185 ntBASIC14.61□□□□□ -0.07
TMEM238C9JI98 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.61□□□□□ -0.07
TMEM238C9JI98 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM238C9JI98 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM238C9JI98 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TMEM238C9JI98 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TMEM238C9JI98 AL391005.1-201ENST00000623953 2435 ntBASIC14.61□□□□□ -0.07
TMEM238C9JI98 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 AC009831.1-201ENST00000580420 1582 ntBASIC14.6□□□□□ -0.07
TMEM238C9JI98 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 AC133552.2-201ENST00000619106 1032 ntBASIC14.6□□□□□ -0.07
TMEM238C9JI98 LINC01960-201ENST00000563759 1884 ntBASIC14.6□□□□□ -0.07
TMEM238C9JI98 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM238C9JI98 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TMEM238C9JI98 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TMEM238C9JI98 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM238C9JI98 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM238C9JI98 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
TMEM238C9JI98 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM238C9JI98 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.58□□□□□ -0.07
TMEM238C9JI98 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM238C9JI98 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM238C9JI98 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
TMEM238C9JI98 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM238C9JI98 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TMEM238C9JI98 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM238C9JI98 AC098818.2-201ENST00000564925 2320 ntBASIC14.58□□□□□ -0.08
TMEM238C9JI98 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM238C9JI98 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 NEFHP1-201ENST00000412845 2629 ntBASIC14.58□□□□□ -0.08
TMEM238C9JI98 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
TMEM238C9JI98 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238C9JI98 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238C9JI98 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238C9JI98 OXCT2P1-201ENST00000447263 1535 ntBASIC14.57□□□□□ -0.08
TMEM238C9JI98 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM238C9JI98 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238C9JI98 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM238C9JI98 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238C9JI98 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM238C9JI98 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms