Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 AC112907.3-201ENST00000577781 2400 ntBASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 AC121338.2-201ENST00000622535 1744 ntBASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 TNXA-203ENST00000507684 2038 ntBASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV12-1A0A0B4J245 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 MIR639-201ENST00000384974 98 ntBASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV12-1A0A0B4J245 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 BID-203ENST00000399765 1879 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV12-1A0A0B4J245 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAV12-1A0A0B4J245 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms