Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 AC003102.1-202ENST00000563394 1796 ntBASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV13-1A0A0B4J241 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 FEM1AP1-201ENST00000431297 1995 ntBASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 AC010525.1-201ENST00000585559 441 ntBASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 AL391422.3-201ENST00000603791 2761 ntBASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV13-1A0A0B4J241 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV13-1A0A0B4J241 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-1A0A0B4J241 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-1A0A0B4J241 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-1A0A0B4J241 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms