Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 LINC01024-206ENST00000522747 1044 ntTSL 3 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 BOLA3P1-201ENST00000530713 355 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 LINC02396-203ENST00000551922 525 ntTSL 5 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC104041.1-201ENST00000560054 569 ntTSL 5 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 MIR4253-201ENST00000581187 68 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 RPL12P41-201ENST00000599500 498 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AC010904.2-201ENST00000606959 634 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 TRERF1-203ENST00000372917 3914 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AMBRA1-211ENST00000533727 4817 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 AL356273.3-201ENST00000623474 1989 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 PTPN20-225ENST00000511769 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 SALL2-206ENST00000613414 1566 ntTSL 2 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 APTX-205ENST00000379819 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 TCOF1-203ENST00000394269 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 EEF1A1P6-201ENST00000434005 1384 ntBASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 NLRX1-203ENST00000409265 3665 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
SYCE2Q6PIF2 CPNE4-209ENST00000512055 5431 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 SPTB-208ENST00000556626 10153 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AP003035.1-201ENST00000533748 1417 ntBASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 CYP17A1-207ENST00000639393 1684 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 MYO10-203ENST00000505695 4803 ntTSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 KIAA1324-203ENST00000369939 3442 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 CALCR-201ENST00000359558 3696 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ITGAD-201ENST00000389202 3912 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 LINC01055-201ENST00000435067 1721 ntTSL 3 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AC009060.1-202ENST00000502126 2242 ntTSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 JUP-203ENST00000393931 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 LILRB1-206ENST00000396332 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AP4S1-201ENST00000216366 2256 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 MROH7-206ENST00000421030 4329 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 GDNF-201ENST00000326524 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 SPRR4-201ENST00000328051 733 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 IGHV1-46-201ENST00000390622 655 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AC068279.1-201ENST00000444323 888 ntBASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 FGF12-AS1-202ENST00000530635 555 ntTSL 4 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AC007218.1-201ENST00000561538 660 ntTSL 3 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 CMC2-207ENST00000564174 424 ntTSL 3 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 FXYD1-206ENST00000588715 486 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 MAGOH3P-201ENST00000605130 447 ntBASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 MCRIP2P2-201ENST00000605276 209 ntBASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AL138995.1-201ENST00000614633 675 ntBASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 SNX20-201ENST00000300590 3304 ntTSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AP001094.2-201ENST00000578897 2315 ntBASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AL079342.3-201ENST00000624924 2061 ntBASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 SYVN1-206ENST00000526060 3144 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 COPA-201ENST00000241704 4789 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 PTCH1-208ENST00000430669 8232 ntTSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 ZNF781-203ENST00000590008 2148 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 STXBP5-AS1-201ENST00000367477 2927 ntTSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 MFSD9-201ENST00000258436 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 KDM4D-202ENST00000536741 2737 ntAPPRIS P1 TSL 4 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 AC022148.1-201ENST00000316807 3267 ntTSL 2 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 MUC4-204ENST00000349607 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 PDPN-203ENST00000376061 1368 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 GRAP2-201ENST00000344138 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 SLC25A14-214ENST00000545805 1650 ntTSL 5 BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 LAMP3-201ENST00000265598 3375 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SYCE2Q6PIF2 DNAJA2-201ENST00000317089 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 AC091078.3-201ENST00000556708 2284 ntTSL 2 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 CAMKK2-216ENST00000545538 3797 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 COG2-202ENST00000366669 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 NR4A1-206ENST00000545748 3511 ntTSL 2 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 CLDN4-202ENST00000431918 4108 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 AC104667.1-201ENST00000417947 2057 ntTSL 2 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 PAX8-201ENST00000263334 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 EPB41L2-208ENST00000524581 3090 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 METTL15-203ENST00000406787 4304 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 CCDC170-201ENST00000239374 5293 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 MTMR12-202ENST00000280285 4966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 NET1-201ENST00000355029 3402 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 NDUFC2-203ENST00000527806 1888 ntTSL 2 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 LINC00426-207ENST00000447147 1589 ntTSL 3 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 CBFA2T2-202ENST00000344201 1181 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 SPAG11B-205ENST00000398462 655 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 MIR1208-201ENST00000408334 73 ntBASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 LDAH-206ENST00000419825 826 ntTSL 3 BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 CRP-205ENST00000437342 1063 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 ADI1P1-201ENST00000438914 538 ntBASIC10.75□□□□□ -0.69
SYCE2Q6PIF2 MOBP-210ENST00000447324 566 ntAPPRIS ALT2 TSL 4 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms