Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4B1Q9Y6B7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 BX842568.3-201ENST00000418104 571 ntBASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
AP4B1Q9Y6B7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 MIR939-201ENST00000401314 82 ntBASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 AP001330.3-201ENST00000520123 633 ntBASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 AC027682.1-201ENST00000562846 899 ntBASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 AC233992.3-201ENST00000607491 485 ntBASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 OXCT2P1-201ENST00000447263 1535 ntBASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 AC019069.1-201ENST00000610008 1333 ntBASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4B1Q9Y6B7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 OR2I1P-207ENST00000453522 948 ntBASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 AF213884.3-201ENST00000563833 479 ntBASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 AL136967.2-201ENST00000623968 743 ntBASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 AP005212.1-201ENST00000581547 1997 ntBASIC19.94■□□□□ 0.78
AP4B1Q9Y6B7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4B1Q9Y6B7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms