Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HCFC2Q9Y5Z7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 MIR718-201ENST00000390190 70 ntBASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 FAM197Y4-202ENST00000622692 608 ntBASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22■■□□□ 1.11
HCFC2Q9Y5Z7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 C1QBPP2-201ENST00000528754 825 ntBASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 AC092368.3-202ENST00000574180 1591 ntBASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HCFC2Q9Y5Z7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 AC092053.2-201ENST00000640557 1818 ntBASIC21.98■■□□□ 1.11
HCFC2Q9Y5Z7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 KRT17P3-201ENST00000420566 1262 ntBASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HCFC2Q9Y5Z7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 C11orf96-202ENST00000528572 1834 ntBASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HCFC2Q9Y5Z7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
HCFC2Q9Y5Z7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 KRT18P68-201ENST00000392293 1000 ntBASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 RN7SL471P-201ENST00000580476 299 ntBASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 MIR4497-201ENST00000583208 89 ntBASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HCFC2Q9Y5Z7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HCFC2Q9Y5Z7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms