Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.51■□□□□ 0.71
IFT52Q9Y366 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.51■□□□□ 0.71
IFT52Q9Y366 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.51■□□□□ 0.71
IFT52Q9Y366 AC091305.1-201ENST00000479476 895 ntBASIC19.51■□□□□ 0.71
IFT52Q9Y366 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.51■□□□□ 0.71
IFT52Q9Y366 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
IFT52Q9Y366 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.51■□□□□ 0.71
IFT52Q9Y366 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IFT52Q9Y366 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 AC055733.4-201ENST00000638462 1354 ntBASIC19.5■□□□□ 0.71
IFT52Q9Y366 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 MIR572-201ENST00000384983 95 ntBASIC19.5■□□□□ 0.71
IFT52Q9Y366 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 AC110285.6-201ENST00000617652 491 ntBASIC19.5■□□□□ 0.71
IFT52Q9Y366 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 BX005040.4-201ENST00000637145 1518 ntBASIC19.5■□□□□ 0.71
IFT52Q9Y366 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IFT52Q9Y366 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IFT52Q9Y366 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 MIR939-201ENST00000401314 82 ntBASIC19.49■□□□□ 0.71
IFT52Q9Y366 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 AC005224.4-201ENST00000583262 1652 ntBASIC19.49■□□□□ 0.71
IFT52Q9Y366 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
IFT52Q9Y366 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.49■□□□□ 0.71
IFT52Q9Y366 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
IFT52Q9Y366 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 AL049796.1-201ENST00000565336 1766 ntBASIC19.48■□□□□ 0.71
IFT52Q9Y366 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.48■□□□□ 0.71
IFT52Q9Y366 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.48■□□□□ 0.71
IFT52Q9Y366 AF213884.3-201ENST00000563833 479 ntBASIC19.48■□□□□ 0.71
IFT52Q9Y366 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.48■□□□□ 0.71
IFT52Q9Y366 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
IFT52Q9Y366 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.48■□□□□ 0.71
IFT52Q9Y366 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.48■□□□□ 0.71
IFT52Q9Y366 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
IFT52Q9Y366 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT52Q9Y366 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.47■□□□□ 0.71
IFT52Q9Y366 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
IFT52Q9Y366 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IFT52Q9Y366 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT52Q9Y366 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
IFT52Q9Y366 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.47■□□□□ 0.71
IFT52Q9Y366 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IFT52Q9Y366 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.47■□□□□ 0.71
IFT52Q9Y366 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms