Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 AC006128.1-201ENST00000624704 1661 ntBASIC19.91■□□□□ 0.78
NIPSNAP3AQ9UFN0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 AC092667.1-201ENST00000434301 2586 ntBASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NIPSNAP3AQ9UFN0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 MIR4466-201ENST00000606121 54 ntBASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.89■□□□□ 0.77
NIPSNAP3AQ9UFN0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 AL356441.2-201ENST00000443009 864 ntBASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.88■□□□□ 0.77
NIPSNAP3AQ9UFN0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.87■□□□□ 0.77
NIPSNAP3AQ9UFN0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 AL121603.2-201ENST00000557373 2117 ntBASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms