Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPNE7Q9UBL6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.3■□□□□ 0.84
CPNE7Q9UBL6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 AL138781.1-201ENST00000566567 1274 ntBASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 AC016405.3-201ENST00000607710 860 ntBASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CPNE7Q9UBL6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 AL512625.2-201ENST00000417533 625 ntBASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPNE7Q9UBL6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 MKRN4P-201ENST00000444706 1521 ntBASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 AC093787.1-201ENST00000450396 207 ntBASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CPNE7Q9UBL6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
CPNE7Q9UBL6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPNE7Q9UBL6 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 AC091799.1-201ENST00000422823 811 ntBASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.26■□□□□ 0.83
CPNE7Q9UBL6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 RARRES2P4-201ENST00000514074 484 ntBASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.25■□□□□ 0.83
CPNE7Q9UBL6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms