Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPSF2Q9P2I0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CPSF2Q9P2I0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
CPSF2Q9P2I0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CPSF2Q9P2I0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPSF2Q9P2I0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 AL049796.1-201ENST00000565336 1766 ntBASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPSF2Q9P2I0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.89■□□□□ 0.94
CPSF2Q9P2I0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPSF2Q9P2I0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPSF2Q9P2I0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPSF2Q9P2I0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.94
CPSF2Q9P2I0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CPSF2Q9P2I0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms