Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 AC005224.4-201ENST00000583262 1652 ntBASIC19.45■□□□□ 0.7
RLIMQ9NVW2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.45■□□□□ 0.7
RLIMQ9NVW2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RLIMQ9NVW2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 AC142381.2-201ENST00000566120 298 ntBASIC19.44■□□□□ 0.7
RLIMQ9NVW2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RLIMQ9NVW2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RLIMQ9NVW2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.42■□□□□ 0.7
RLIMQ9NVW2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 AC005837.3-201ENST00000612163 286 ntBASIC19.41■□□□□ 0.7
RLIMQ9NVW2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RLIMQ9NVW2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 AC012414.1-201ENST00000556676 535 ntBASIC19.4■□□□□ 0.7
RLIMQ9NVW2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
RLIMQ9NVW2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.39■□□□□ 0.7
RLIMQ9NVW2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RLIMQ9NVW2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RLIMQ9NVW2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms