Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 AL356441.2-201ENST00000443009 864 ntBASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE2Q9NRR3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 BX842568.3-201ENST00000418104 571 ntBASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 AC133561.4-201ENST00000566112 224 ntBASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 AC009237.3-201ENST00000393279 1427 ntBASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDC42SE2Q9NRR3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE2Q9NRR3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE2Q9NRR3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.34□□□□□ -0.11
CDC42SE2Q9NRR3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms