Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RTN4Q9NQC3 Z98882.1-201ENST00000622160 2253 ntBASIC24.44■■□□□ 1.5
RTN4Q9NQC3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4Q9NQC3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4Q9NQC3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4Q9NQC3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC24.44■■□□□ 1.5
RTN4Q9NQC3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 AP000974.1-201ENST00000623909 2387 ntBASIC24.43■■□□□ 1.5
RTN4Q9NQC3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4Q9NQC3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 TSPY13P-201ENST00000338964 914 ntBASIC24.42■■□□□ 1.5
RTN4Q9NQC3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
RTN4Q9NQC3 AL133373.2-201ENST00000623187 2828 ntBASIC24.41■■□□□ 1.5
RTN4Q9NQC3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RTN4Q9NQC3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 MIR4508-201ENST00000584178 70 ntBASIC24.4■■□□□ 1.5
RTN4Q9NQC3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.4■■□□□ 1.5
RTN4Q9NQC3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 AC012313.1-201ENST00000593393 3059 ntBASIC24.39■■□□□ 1.5
RTN4Q9NQC3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RTN4Q9NQC3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTN4Q9NQC3 SNX5-217ENST00000606557 1087 ntBASIC24.39■■□□□ 1.49
RTN4Q9NQC3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTN4Q9NQC3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RTN4Q9NQC3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 AC144652.1-201ENST00000609974 1624 ntBASIC24.38■■□□□ 1.49
RTN4Q9NQC3 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTN4Q9NQC3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms