Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NRIP3Q9NQ35 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 AC012414.1-201ENST00000556676 535 ntBASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NRIP3Q9NQ35 AC006128.1-201ENST00000624704 1661 ntBASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 SUDS3P1-201ENST00000505831 966 ntBASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 PLK5-205ENST00000642079 1969 ntBASIC18.79■□□□□ 0.6
NRIP3Q9NQ35 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
NRIP3Q9NQ35 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 FEM1AP1-201ENST00000431297 1995 ntBASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NRIP3Q9NQ35 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NRIP3Q9NQ35 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 EEF1DP3-203ENST00000566025 782 ntBASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.76■□□□□ 0.59
NRIP3Q9NQ35 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms