Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 AC112229.1-201ENST00000639295 961 ntBASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 AC073111.5-205ENST00000641717 521 ntBASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VRTNQ9H8Y1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 AC231657.2-201ENST00000624556 255 ntBASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 AC026310.3-201ENST00000625186 2373 ntBASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 FEM1AP4-201ENST00000443167 1987 ntBASIC22.34■■□□□ 1.17
VRTNQ9H8Y1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 AL024507.2-201ENST00000606070 2574 ntBASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
VRTNQ9H8Y1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
VRTNQ9H8Y1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.33■■□□□ 1.16
VRTNQ9H8Y1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 AC091799.1-201ENST00000422823 811 ntBASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
VRTNQ9H8Y1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 AL162412.1-201ENST00000567129 965 ntBASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
VRTNQ9H8Y1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 AL049796.1-201ENST00000565336 1766 ntBASIC22.3■■□□□ 1.16
VRTNQ9H8Y1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
VRTNQ9H8Y1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms