Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.89■□□□□ 0.94
CCDC68Q9H2F9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC68Q9H2F9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC68Q9H2F9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC68Q9H2F9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 TPRG1LP1-201ENST00000598702 760 ntBASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC68Q9H2F9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC68Q9H2F9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC68Q9H2F9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 AC079140.4-201ENST00000507448 529 ntBASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC68Q9H2F9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC68Q9H2F9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC68Q9H2F9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC68Q9H2F9 AL049796.1-201ENST00000565336 1766 ntBASIC20.83■□□□□ 0.93
CCDC68Q9H2F9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC68Q9H2F9 AC027612.3-201ENST00000413684 1047 ntBASIC20.83■□□□□ 0.93
CCDC68Q9H2F9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC68Q9H2F9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC68Q9H2F9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CCDC68Q9H2F9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
CCDC68Q9H2F9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC68Q9H2F9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC68Q9H2F9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms