Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX47Q9H0S4 AC121338.2-201ENST00000622535 1744 ntBASIC21.75■■□□□ 1.07
DDX47Q9H0S4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 SMUG1P1-201ENST00000590640 811 ntBASIC21.74■■□□□ 1.07
DDX47Q9H0S4 MIR4466-201ENST00000606121 54 ntBASIC21.74■■□□□ 1.07
DDX47Q9H0S4 AC011298.3-201ENST00000615796 283 ntBASIC21.74■■□□□ 1.07
DDX47Q9H0S4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX47Q9H0S4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DDX47Q9H0S4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 DUX4L19-201ENST00000557448 1267 ntBASIC21.72■■□□□ 1.07
DDX47Q9H0S4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX47Q9H0S4 AC007952.6-201ENST00000573168 2673 ntBASIC21.72■■□□□ 1.07
DDX47Q9H0S4 AC003957.1-201ENST00000625108 2673 ntBASIC21.72■■□□□ 1.07
DDX47Q9H0S4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX47Q9H0S4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
DDX47Q9H0S4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
DDX47Q9H0S4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms