Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM2Q9C040 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM2Q9C040 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM2Q9C040 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM2Q9C040 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM2Q9C040 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM2Q9C040 TPRG1LP1-201ENST00000598702 760 ntBASIC19.18■□□□□ 0.66
TRIM2Q9C040 AC087623.3-201ENST00000607047 1098 ntBASIC19.18■□□□□ 0.66
TRIM2Q9C040 AC092666.2-201ENST00000613287 246 ntBASIC19.18■□□□□ 0.66
TRIM2Q9C040 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM2Q9C040 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM2Q9C040 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM2Q9C040 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRIM2Q9C040 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM2Q9C040 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM2Q9C040 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM2Q9C040 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRIM2Q9C040 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 AC053503.5-201ENST00000601508 636 ntBASIC19.16■□□□□ 0.66
TRIM2Q9C040 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.16■□□□□ 0.66
TRIM2Q9C040 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM2Q9C040 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM2Q9C040 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM2Q9C040 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 EEF1DP3-203ENST00000566025 782 ntBASIC19.15■□□□□ 0.66
TRIM2Q9C040 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM2Q9C040 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM2Q9C040 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TRIM2Q9C040 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM2Q9C040 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM2Q9C040 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM2Q9C040 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM2Q9C040 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM2Q9C040 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM2Q9C040 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIM2Q9C040 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM2Q9C040 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM2Q9C040 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM2Q9C040 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM2Q9C040 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM2Q9C040 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM2Q9C040 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM2Q9C040 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM2Q9C040 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM2Q9C040 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM2Q9C040 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM2Q9C040 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM2Q9C040 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms