Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 AC013268.1-206ENST00000638368 961 ntBASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 AC112229.1-201ENST00000639295 961 ntBASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC7.13□□□□□ -1.27
KRTAP4-3Q9BYR4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 SLC29A4P1-201ENST00000398760 971 ntBASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 BX276092.2-201ENST00000417668 665 ntBASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 OR2A1-AS1-201ENST00000462305 773 ntBASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 KRT18P20-201ENST00000548986 1279 ntBASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 KRT18P6-201ENST00000555540 1265 ntBASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 AC242852.2-201ENST00000615738 1807 ntBASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 AF106564.1-201ENST00000607058 2553 ntBASIC7.12□□□□□ -1.27
KRTAP4-3Q9BYR4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 MKRN4P-201ENST00000444706 1521 ntBASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 RNA5SP413-201ENST00000516373 109 ntBASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 AC133552.2-202ENST00000575694 574 ntBASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 AC008175.2-201ENST00000612840 297 ntBASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
KRTAP4-3Q9BYR4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms