Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 MCRIP2P1-201ENST00000394346 511 ntBASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 RPPH1-201ENST00000516869 333 ntBASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.6■■□□□ 1.69
RTFDC1Q9BY42 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 AC245052.3-201ENST00000450182 901 ntBASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 PNMA6B-201ENST00000538162 1200 ntBASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTFDC1Q9BY42 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTFDC1Q9BY42 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.68
RTFDC1Q9BY42 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 SAPCD2P1-201ENST00000395413 1184 ntBASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 RN7SL471P-201ENST00000580476 299 ntBASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
RTFDC1Q9BY42 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
RTFDC1Q9BY42 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 MIR718-201ENST00000390190 70 ntBASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
RTFDC1Q9BY42 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 AC092053.2-201ENST00000640557 1818 ntBASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 KRT18P68-201ENST00000392293 1000 ntBASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 MIR4497-201ENST00000583208 89 ntBASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.54■■□□□ 1.68
RTFDC1Q9BY42 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RTFDC1Q9BY42 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms