Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO3Q9BXY4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO3Q9BXY4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.28■□□□□ 0.68
RSPO3Q9BXY4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.28■□□□□ 0.68
RSPO3Q9BXY4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.28■□□□□ 0.68
RSPO3Q9BXY4 AL139246.5-201ENST00000606645 996 ntBASIC19.28■□□□□ 0.68
RSPO3Q9BXY4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RSPO3Q9BXY4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 MIR6084-201ENST00000622012 110 ntBASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RSPO3Q9BXY4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RSPO3Q9BXY4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RSPO3Q9BXY4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RSPO3Q9BXY4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 AC121338.2-201ENST00000622535 1744 ntBASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 AC027702.1-201ENST00000563810 1770 ntBASIC19.26■□□□□ 0.67
RSPO3Q9BXY4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 AC053503.5-201ENST00000601508 636 ntBASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RSPO3Q9BXY4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RSPO3Q9BXY4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RSPO3Q9BXY4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 AC005837.3-201ENST00000612163 286 ntBASIC19.22■□□□□ 0.67
RSPO3Q9BXY4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms