Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40CQ96S21 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB40CQ96S21 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 AP004607.7-201ENST00000527152 1677 ntBASIC16.91■□□□□ 0.3
RAB40CQ96S21 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 OR2I1P-207ENST00000453522 948 ntBASIC16.91■□□□□ 0.3
RAB40CQ96S21 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB40CQ96S21 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB40CQ96S21 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB40CQ96S21 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB40CQ96S21 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
RAB40CQ96S21 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 TSPY9P-201ENST00000440215 945 ntBASIC16.9■□□□□ 0.3
RAB40CQ96S21 TSPY11P-201ENST00000442607 1045 ntBASIC16.9■□□□□ 0.3
RAB40CQ96S21 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.9■□□□□ 0.3
RAB40CQ96S21 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB40CQ96S21 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB40CQ96S21 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB40CQ96S21 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB40CQ96S21 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
RAB40CQ96S21 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RAB40CQ96S21 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB40CQ96S21 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB40CQ96S21 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RAB40CQ96S21 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB40CQ96S21 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB40CQ96S21 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB40CQ96S21 AC020907.5-201ENST00000624372 1936 ntBASIC16.88■□□□□ 0.29
RAB40CQ96S21 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB40CQ96S21 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB40CQ96S21 AC121338.2-201ENST00000622535 1744 ntBASIC16.88■□□□□ 0.29
RAB40CQ96S21 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB40CQ96S21 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB40CQ96S21 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB40CQ96S21 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RAB40CQ96S21 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB40CQ96S21 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB40CQ96S21 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB40CQ96S21 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB40CQ96S21 AC027702.1-201ENST00000563810 1770 ntBASIC16.87■□□□□ 0.29
RAB40CQ96S21 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB40CQ96S21 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms