Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.87■□□□□ 0.77
ITCHQ96J02 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.87■□□□□ 0.77
ITCHQ96J02 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ITCHQ96J02 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ITCHQ96J02 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ITCHQ96J02 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ITCHQ96J02 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.87■□□□□ 0.77
ITCHQ96J02 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ITCHQ96J02 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ITCHQ96J02 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ITCHQ96J02 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.87■□□□□ 0.77
ITCHQ96J02 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
ITCHQ96J02 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.86■□□□□ 0.77
ITCHQ96J02 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 IGHV3-19-201ENST00000521488 291 ntBASIC19.86■□□□□ 0.77
ITCHQ96J02 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.86■□□□□ 0.77
ITCHQ96J02 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ITCHQ96J02 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ITCHQ96J02 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.85■□□□□ 0.77
ITCHQ96J02 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ITCHQ96J02 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ITCHQ96J02 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ITCHQ96J02 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ITCHQ96J02 PLK5-205ENST00000642079 1969 ntBASIC19.85■□□□□ 0.77
ITCHQ96J02 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ITCHQ96J02 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.85■□□□□ 0.77
ITCHQ96J02 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.85■□□□□ 0.77
ITCHQ96J02 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ITCHQ96J02 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ITCHQ96J02 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ITCHQ96J02 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ITCHQ96J02 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ITCHQ96J02 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.85■□□□□ 0.77
ITCHQ96J02 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ITCHQ96J02 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ITCHQ96J02 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ITCHQ96J02 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.84■□□□□ 0.77
ITCHQ96J02 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.84■□□□□ 0.77
ITCHQ96J02 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.84■□□□□ 0.77
ITCHQ96J02 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.84■□□□□ 0.77
ITCHQ96J02 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITCHQ96J02 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ITCHQ96J02 AC055733.4-201ENST00000638462 1354 ntBASIC19.83■□□□□ 0.77
ITCHQ96J02 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
ITCHQ96J02 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ITCHQ96J02 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ITCHQ96J02 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.83■□□□□ 0.77
ITCHQ96J02 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.83■□□□□ 0.77
ITCHQ96J02 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.83■□□□□ 0.77
ITCHQ96J02 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.83■□□□□ 0.77
ITCHQ96J02 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ITCHQ96J02 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITCHQ96J02 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
ITCHQ96J02 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITCHQ96J02 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITCHQ96J02 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
ITCHQ96J02 AC121338.2-201ENST00000622535 1744 ntBASIC19.82■□□□□ 0.76
ITCHQ96J02 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 GABARAPL3-202ENST00000624044 1851 ntBASIC19.82■□□□□ 0.76
ITCHQ96J02 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
ITCHQ96J02 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.82■□□□□ 0.76
ITCHQ96J02 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.82■□□□□ 0.76
ITCHQ96J02 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.82■□□□□ 0.76
ITCHQ96J02 AC024257.2-201ENST00000549699 147 ntBASIC19.82■□□□□ 0.76
ITCHQ96J02 AL136162.1-201ENST00000607711 1078 ntBASIC19.82■□□□□ 0.76
ITCHQ96J02 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
ITCHQ96J02 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ITCHQ96J02 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.82■□□□□ 0.76
ITCHQ96J02 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITCHQ96J02 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ITCHQ96J02 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms