Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBGCP3Q96CW5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBGCP3Q96CW5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBGCP3Q96CW5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.26■□□□□ 0.83
TUBGCP3Q96CW5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBGCP3Q96CW5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 PLK5-205ENST00000642079 1969 ntBASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 AC133561.4-201ENST00000566112 224 ntBASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBGCP3Q96CW5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 AC092667.1-201ENST00000434301 2586 ntBASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 AC126544.1-201ENST00000580842 1059 ntBASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 AC233992.3-201ENST00000607491 485 ntBASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.24■□□□□ 0.83
TUBGCP3Q96CW5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 UNC93B3-201ENST00000308076 687 ntBASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TUBGCP3Q96CW5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.22■□□□□ 0.83
TUBGCP3Q96CW5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 AC009237.3-201ENST00000393279 1427 ntBASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TUBGCP3Q96CW5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.2■□□□□ 0.83
TUBGCP3Q96CW5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TUBGCP3Q96CW5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms