Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD2Q8NHY2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 AC006455.2-201ENST00000429931 906 ntBASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD2Q8NHY2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 pRNA.6-201ENST00000610482 90 ntBASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 pRNA.5-201ENST00000612139 90 ntBASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 pRNA.11-201ENST00000618423 90 ntBASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 pRNA.13-201ENST00000619112 90 ntBASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD2Q8NHY2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
RFWD2Q8NHY2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 MIR6724-1-201ENST00000616420 92 ntBASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 MIR6724-2-201ENST00000616483 92 ntBASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 MIR6724-4-201ENST00000617390 92 ntBASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 MIR6724-3-201ENST00000622482 92 ntBASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 AC020907.5-201ENST00000624372 1936 ntBASIC20.59■□□□□ 0.89
RFWD2Q8NHY2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 AC068587.7-201ENST00000641602 218 ntBASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.58■□□□□ 0.89
RFWD2Q8NHY2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFWD2Q8NHY2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFWD2Q8NHY2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFWD2Q8NHY2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFWD2Q8NHY2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFWD2Q8NHY2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
RFWD2Q8NHY2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFWD2Q8NHY2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms