Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 AC133637.1-201ENST00000624115 1537 ntBASIC20.2■□□□□ 0.82
HIPK4Q8NE63 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK4Q8NE63 GABARAPL3-202ENST00000624044 1851 ntBASIC20.2■□□□□ 0.82
HIPK4Q8NE63 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 AP005212.1-201ENST00000581547 1997 ntBASIC20.19■□□□□ 0.82
HIPK4Q8NE63 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK4Q8NE63 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 pRNA.6-201ENST00000610482 90 ntBASIC20.18■□□□□ 0.82
HIPK4Q8NE63 pRNA.5-201ENST00000612139 90 ntBASIC20.18■□□□□ 0.82
HIPK4Q8NE63 pRNA.11-201ENST00000618423 90 ntBASIC20.18■□□□□ 0.82
HIPK4Q8NE63 pRNA.13-201ENST00000619112 90 ntBASIC20.18■□□□□ 0.82
HIPK4Q8NE63 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HIPK4Q8NE63 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 KRT16P3-201ENST00000439127 1283 ntBASIC20.17■□□□□ 0.82
HIPK4Q8NE63 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 AC079089.2-201ENST00000531211 1277 ntBASIC20.17■□□□□ 0.82
HIPK4Q8NE63 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIPK4Q8NE63 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.16■□□□□ 0.82
HIPK4Q8NE63 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HIPK4Q8NE63 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIPK4Q8NE63 AC006455.2-201ENST00000429931 906 ntBASIC20.15■□□□□ 0.82
HIPK4Q8NE63 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms