Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SIMC1Q8NDZ2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 AP004607.4-201ENST00000530158 1459 ntBASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SIMC1Q8NDZ2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.66■□□□□ 0.74
SIMC1Q8NDZ2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 AC053503.5-201ENST00000601508 636 ntBASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 AC104187.1-201ENST00000607510 612 ntBASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 AC061975.6-201ENST00000579045 1553 ntBASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.65■□□□□ 0.74
SIMC1Q8NDZ2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SIMC1Q8NDZ2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
SIMC1Q8NDZ2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.64■□□□□ 0.74
SIMC1Q8NDZ2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SIMC1Q8NDZ2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIMC1Q8NDZ2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIMC1Q8NDZ2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms