Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 RNA5SP413-201ENST00000516373 109 ntBASIC22.62■■□□□ 1.21
VPS52Q8N1B4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.62■■□□□ 1.21
VPS52Q8N1B4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 AL512625.2-201ENST00000417533 625 ntBASIC22.61■■□□□ 1.21
VPS52Q8N1B4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.61■■□□□ 1.21
VPS52Q8N1B4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 POU5F1P4-201ENST00000413175 1085 ntBASIC22.6■■□□□ 1.21
VPS52Q8N1B4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VPS52Q8N1B4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 POU5F1P3-201ENST00000428824 1078 ntBASIC22.59■■□□□ 1.21
VPS52Q8N1B4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
VPS52Q8N1B4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 AC092118.2-201ENST00000613495 667 ntBASIC22.58■■□□□ 1.21
VPS52Q8N1B4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VPS52Q8N1B4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
VPS52Q8N1B4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.57■■□□□ 1.2
VPS52Q8N1B4 BX276092.2-201ENST00000417668 665 ntBASIC22.57■■□□□ 1.2
VPS52Q8N1B4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms