Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.2■■□□□ 1.14
TTC30AQ86WT1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
TTC30AQ86WT1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.19■■□□□ 1.14
TTC30AQ86WT1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TTC30AQ86WT1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 MYCNOS-205ENST00000641950 531 ntBASIC22.18■■□□□ 1.14
TTC30AQ86WT1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TTC30AQ86WT1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 KRT16P2-201ENST00000414673 1423 ntBASIC22.17■■□□□ 1.14
TTC30AQ86WT1 AC026310.3-201ENST00000625186 2373 ntBASIC22.17■■□□□ 1.14
TTC30AQ86WT1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
TTC30AQ86WT1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
TTC30AQ86WT1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 KRT18P11-201ENST00000435214 1283 ntBASIC22.15■■□□□ 1.14
TTC30AQ86WT1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 SLC7A5P1-201ENST00000568957 537 ntBASIC22.15■■□□□ 1.14
TTC30AQ86WT1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 MFSD11-216ENST00000590393 1141 ntBASIC22.15■■□□□ 1.14
TTC30AQ86WT1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TTC30AQ86WT1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC30AQ86WT1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC30AQ86WT1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TTC30AQ86WT1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 AC011767.1-201ENST00000617410 1153 ntBASIC22.14■■□□□ 1.13
TTC30AQ86WT1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 AL024507.2-201ENST00000606070 2574 ntBASIC22.14■■□□□ 1.13
TTC30AQ86WT1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.14■■□□□ 1.13
TTC30AQ86WT1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.14■■□□□ 1.13
TTC30AQ86WT1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms