Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 AL137784.2-201ENST00000607332 1000 ntBASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.01■□□□□ 0.95
LYSMD3Q7Z3D4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 AC016769.1-201ENST00000409132 1010 ntBASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 KRT18P20-201ENST00000548986 1279 ntBASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 AC026310.3-201ENST00000625186 2373 ntBASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21■□□□□ 0.95
LYSMD3Q7Z3D4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYSMD3Q7Z3D4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 AC120498.10-201ENST00000621827 505 ntBASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 AC092437.1-201ENST00000624794 1048 ntBASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYSMD3Q7Z3D4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 KRT16P2-201ENST00000414673 1423 ntBASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 AC006015.1-201ENST00000429970 570 ntBASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LYSMD3Q7Z3D4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.96■□□□□ 0.95
LYSMD3Q7Z3D4 MYCNOS-205ENST00000641950 531 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms