Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HIST2H3AQ71DI3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST2H3AQ71DI3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 AC061975.6-201ENST00000579045 1553 ntBASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 AC138907.5-202ENST00000569484 235 ntBASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST2H3AQ71DI3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 POU5F1P4-201ENST00000413175 1085 ntBASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST2H3AQ71DI3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 AP004607.4-201ENST00000530158 1459 ntBASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.28■□□□□ 0.52
HIST2H3AQ71DI3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIST2H3AQ71DI3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms