Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3F3CQ6NXT2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
H3F3CQ6NXT2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
H3F3CQ6NXT2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3F3CQ6NXT2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3F3CQ6NXT2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
H3F3CQ6NXT2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3F3CQ6NXT2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.33■□□□□ 0.69
H3F3CQ6NXT2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3F3CQ6NXT2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 AC008694.1-202ENST00000636953 945 ntBASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 GUSBP5-202ENST00000510805 1989 ntBASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.32■□□□□ 0.68
H3F3CQ6NXT2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 AC069152.1-201ENST00000438030 544 ntBASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3F3CQ6NXT2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 AC233723.2-201ENST00000623798 2106 ntBASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 AC133041.1-202ENST00000642053 222 ntBASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 MKRN4P-201ENST00000444706 1521 ntBASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3F3CQ6NXT2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 MIPEPP3-201ENST00000412105 444 ntBASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 AC091799.1-201ENST00000422823 811 ntBASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 AC093787.1-201ENST00000450396 207 ntBASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 RARRES2P4-201ENST00000514074 484 ntBASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 MIR4758-201ENST00000577688 71 ntBASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 AC016405.3-201ENST00000607710 860 ntBASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 C11orf96-202ENST00000528572 1834 ntBASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3F3CQ6NXT2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms