Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 AC098818.2-201ENST00000564925 2320 ntBASIC20.03■□□□□ 0.8
RNF220Q5VTB9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF220Q5VTB9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 AC018445.3-201ENST00000624177 1945 ntBASIC20.02■□□□□ 0.8
RNF220Q5VTB9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.02■□□□□ 0.8
RNF220Q5VTB9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 AC068587.7-201ENST00000641602 218 ntBASIC20.02■□□□□ 0.8
RNF220Q5VTB9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF220Q5VTB9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.02■□□□□ 0.79
RNF220Q5VTB9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF220Q5VTB9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF220Q5VTB9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.02■□□□□ 0.79
RNF220Q5VTB9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 MIR4466-201ENST00000606121 54 ntBASIC20.01■□□□□ 0.79
RNF220Q5VTB9 AL138724.1-201ENST00000606771 1088 ntBASIC20.01■□□□□ 0.79
RNF220Q5VTB9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF220Q5VTB9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF220Q5VTB9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF220Q5VTB9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF220Q5VTB9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF220Q5VTB9 PTCHD3P2-201ENST00000424937 1205 ntBASIC20■□□□□ 0.79
RNF220Q5VTB9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
RNF220Q5VTB9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20■□□□□ 0.79
RNF220Q5VTB9 DUX4L19-201ENST00000557448 1267 ntBASIC20■□□□□ 0.79
RNF220Q5VTB9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20■□□□□ 0.79
RNF220Q5VTB9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF220Q5VTB9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 AC131281.2-201ENST00000520478 145 ntBASIC19.99■□□□□ 0.79
RNF220Q5VTB9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF220Q5VTB9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms