Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 KRT18P61-201ENST00000585825 1298 ntBASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 AC026471.6-201ENST00000622954 1905 ntBASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDSS1Q5T2R2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PDSS1Q5T2R2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDSS1Q5T2R2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 AC006015.1-201ENST00000429970 570 ntBASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDSS1Q5T2R2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PDSS1Q5T2R2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDSS1Q5T2R2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 SLC7A5P1-201ENST00000568957 537 ntBASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 BID-214ENST00000617586 542 ntTSL 5 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.89■□□□□ 0.61
PDSS1Q5T2R2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 UBE2DNL-204ENST00000602536 740 ntBASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 IKBKGP1-201ENST00000612193 1073 ntBASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 KRT16P2-201ENST00000414673 1423 ntBASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDSS1Q5T2R2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms