Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CD47Q08722 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CD47Q08722 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.36■□□□□ 0.69
CD47Q08722 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.36■□□□□ 0.69
CD47Q08722 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD47Q08722 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.36■□□□□ 0.69
CD47Q08722 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.36■□□□□ 0.69
CD47Q08722 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CD47Q08722 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD47Q08722 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD47Q08722 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD47Q08722 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
CD47Q08722 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.36■□□□□ 0.69
CD47Q08722 AL138724.1-201ENST00000606771 1088 ntBASIC19.36■□□□□ 0.69
CD47Q08722 AL031602.1-201ENST00000633169 911 ntBASIC19.36■□□□□ 0.69
CD47Q08722 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CD47Q08722 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CD47Q08722 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.36■□□□□ 0.69
CD47Q08722 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
CD47Q08722 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.35■□□□□ 0.69
CD47Q08722 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 OR7E47P-201ENST00000546390 1422 ntBASIC19.35■□□□□ 0.69
CD47Q08722 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.35■□□□□ 0.69
CD47Q08722 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CD47Q08722 AC006128.1-201ENST00000624704 1661 ntBASIC19.35■□□□□ 0.69
CD47Q08722 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.35■□□□□ 0.69
CD47Q08722 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.35■□□□□ 0.69
CD47Q08722 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.35■□□□□ 0.69
CD47Q08722 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.35■□□□□ 0.69
CD47Q08722 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CD47Q08722 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.35■□□□□ 0.69
CD47Q08722 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CD47Q08722 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CD47Q08722 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.34■□□□□ 0.69
CD47Q08722 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CD47Q08722 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.34■□□□□ 0.69
CD47Q08722 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.34■□□□□ 0.69
CD47Q08722 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.34■□□□□ 0.69
CD47Q08722 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CD47Q08722 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CD47Q08722 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CD47Q08722 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CD47Q08722 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.33■□□□□ 0.69
CD47Q08722 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.33■□□□□ 0.69
CD47Q08722 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.33■□□□□ 0.69
CD47Q08722 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD47Q08722 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CD47Q08722 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CD47Q08722 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CD47Q08722 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD47Q08722 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD47Q08722 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CD47Q08722 AC087239.1-201ENST00000622671 572 ntBASIC19.33■□□□□ 0.68
CD47Q08722 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD47Q08722 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CD47Q08722 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD47Q08722 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CD47Q08722 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CD47Q08722 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD47Q08722 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.32■□□□□ 0.68
CD47Q08722 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CD47Q08722 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD47Q08722 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD47Q08722 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.32■□□□□ 0.68
CD47Q08722 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD47Q08722 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.32■□□□□ 0.68
CD47Q08722 AC011298.3-201ENST00000615796 283 ntBASIC19.32■□□□□ 0.68
CD47Q08722 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.32■□□□□ 0.68
CD47Q08722 AC068587.7-201ENST00000641602 218 ntBASIC19.32■□□□□ 0.68
CD47Q08722 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CD47Q08722 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD47Q08722 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CD47Q08722 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms