Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 AC110285.6-201ENST00000617652 491 ntBASIC19.2■□□□□ 0.66
RUNX1T1Q06455 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RUNX1T1Q06455 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 AC233992.3-201ENST00000607491 485 ntBASIC19.19■□□□□ 0.66
RUNX1T1Q06455 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RUNX1T1Q06455 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 AC106739.1-201ENST00000617035 715 ntBASIC19.18■□□□□ 0.66
RUNX1T1Q06455 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 FEM1AP4-201ENST00000443167 1987 ntBASIC19.18■□□□□ 0.66
RUNX1T1Q06455 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RUNX1T1Q06455 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 AC008764.7-201ENST00000593779 1081 ntBASIC19.17■□□□□ 0.66
RUNX1T1Q06455 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 AIRN-201ENST00000601203 4374 ntBASIC19.17■□□□□ 0.66
RUNX1T1Q06455 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.17■□□□□ 0.66
RUNX1T1Q06455 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 AF106564.1-201ENST00000607058 2553 ntBASIC19.16■□□□□ 0.66
RUNX1T1Q06455 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 AC133561.4-201ENST00000566112 224 ntBASIC19.16■□□□□ 0.66
RUNX1T1Q06455 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.16■□□□□ 0.66
RUNX1T1Q06455 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms