Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB5BP61020 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB5BP61020 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB5BP61020 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB5BP61020 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAB5BP61020 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB5BP61020 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB5BP61020 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB5BP61020 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB5BP61020 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB5BP61020 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB5BP61020 OXCT2P1-201ENST00000447263 1535 ntBASIC16.42■□□□□ 0.22
RAB5BP61020 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB5BP61020 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RAB5BP61020 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB5BP61020 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.42■□□□□ 0.22
RAB5BP61020 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 AC007613.1-201ENST00000572811 2597 ntBASIC16.41■□□□□ 0.22
RAB5BP61020 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB5BP61020 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB5BP61020 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RAB5BP61020 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAB5BP61020 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB5BP61020 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB5BP61020 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB5BP61020 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB5BP61020 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB5BP61020 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 AC144652.1-201ENST00000609974 1624 ntBASIC16.4■□□□□ 0.22
RAB5BP61020 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB5BP61020 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB5BP61020 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB5BP61020 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.39■□□□□ 0.22
RAB5BP61020 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.39■□□□□ 0.22
RAB5BP61020 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB5BP61020 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
RAB5BP61020 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB5BP61020 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB5BP61020 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAB5BP61020 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RAB5BP61020 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAB5BP61020 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB5BP61020 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB5BP61020 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB5BP61020 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB5BP61020 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB5BP61020 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RAB5BP61020 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAB5BP61020 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
RAB5BP61020 MIR219A2-201ENST00000608502 1504 ntBASIC16.38■□□□□ 0.21
RAB5BP61020 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB5BP61020 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB5BP61020 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB5BP61020 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAB5BP61020 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RAB5BP61020 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms