Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.08■□□□□ 0.64
CDC42P60953 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.08■□□□□ 0.64
CDC42P60953 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CDC42P60953 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDC42P60953 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.07■□□□□ 0.64
CDC42P60953 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDC42P60953 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDC42P60953 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.07■□□□□ 0.64
CDC42P60953 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.07■□□□□ 0.64
CDC42P60953 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.07■□□□□ 0.64
CDC42P60953 AC099791.2-201ENST00000605725 427 ntBASIC19.07■□□□□ 0.64
CDC42P60953 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CDC42P60953 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.07■□□□□ 0.64
CDC42P60953 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDC42P60953 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.07■□□□□ 0.64
CDC42P60953 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDC42P60953 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC42P60953 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC42P60953 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC42P60953 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDC42P60953 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDC42P60953 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDC42P60953 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.06■□□□□ 0.64
CDC42P60953 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CDC42P60953 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.05■□□□□ 0.64
CDC42P60953 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.05■□□□□ 0.64
CDC42P60953 AC239859.2-201ENST00000444165 318 ntBASIC19.05■□□□□ 0.64
CDC42P60953 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.05■□□□□ 0.64
CDC42P60953 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
CDC42P60953 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.05■□□□□ 0.64
CDC42P60953 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.05■□□□□ 0.64
CDC42P60953 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CDC42P60953 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CDC42P60953 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.05■□□□□ 0.64
CDC42P60953 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDC42P60953 AL391422.3-201ENST00000603791 2761 ntBASIC19.04■□□□□ 0.64
CDC42P60953 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
CDC42P60953 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDC42P60953 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.04■□□□□ 0.64
CDC42P60953 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDC42P60953 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDC42P60953 MIR3181-201ENST00000578512 73 ntBASIC19.04■□□□□ 0.64
CDC42P60953 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.04■□□□□ 0.64
CDC42P60953 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDC42P60953 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.04■□□□□ 0.64
CDC42P60953 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDC42P60953 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CDC42P60953 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.04■□□□□ 0.64
CDC42P60953 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDC42P60953 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.04■□□□□ 0.64
CDC42P60953 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC42P60953 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CDC42P60953 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC42P60953 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC42P60953 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.03■□□□□ 0.64
CDC42P60953 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC42P60953 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC42P60953 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDC42P60953 AP006587.3-201ENST00000525742 1516 ntBASIC19.03■□□□□ 0.64
CDC42P60953 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.03■□□□□ 0.64
CDC42P60953 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
CDC42P60953 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC42P60953 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDC42P60953 AC121338.2-201ENST00000622535 1744 ntBASIC19.03■□□□□ 0.64
CDC42P60953 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC42P60953 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC42P60953 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
CDC42P60953 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC42P60953 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC42P60953 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDC42P60953 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDC42P60953 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDC42P60953 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC42P60953 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC42P60953 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC42P60953 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDC42P60953 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC42P60953 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC42P60953 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC42P60953 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms