Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 AC020907.5-201ENST00000624372 1936 ntBASIC17.94■□□□□ 0.46
AP3S2P59780 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
AP3S2P59780 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.93■□□□□ 0.46
AP3S2P59780 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.93■□□□□ 0.46
AP3S2P59780 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 SMG8-203ENST00000578922 2178 ntBASIC17.93■□□□□ 0.46
AP3S2P59780 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
AP3S2P59780 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.93■□□□□ 0.46
AP3S2P59780 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP3S2P59780 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP3S2P59780 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.93■□□□□ 0.46
AP3S2P59780 AL031602.1-201ENST00000633169 911 ntBASIC17.93■□□□□ 0.46
AP3S2P59780 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3S2P59780 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
AP3S2P59780 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 AL020996.1-203ENST00000536896 2307 ntBASIC17.93■□□□□ 0.46
AP3S2P59780 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3S2P59780 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
AP3S2P59780 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
AP3S2P59780 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
AP3S2P59780 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
AP3S2P59780 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
AP3S2P59780 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3S2P59780 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
AP3S2P59780 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3S2P59780 BX323043.1-201ENST00000641006 1765 ntBASIC17.91■□□□□ 0.46
AP3S2P59780 PLK5-205ENST00000642079 1969 ntBASIC17.91■□□□□ 0.46
AP3S2P59780 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.91■□□□□ 0.46
AP3S2P59780 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3S2P59780 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3S2P59780 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 AC027702.1-201ENST00000563810 1770 ntBASIC17.91■□□□□ 0.46
AP3S2P59780 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
AP3S2P59780 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3S2P59780 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S2P59780 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
AP3S2P59780 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
AP3S2P59780 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S2P59780 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.9■□□□□ 0.46
AP3S2P59780 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP3S2P59780 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP3S2P59780 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
AP3S2P59780 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
AP3S2P59780 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP3S2P59780 AC018445.3-201ENST00000624177 1945 ntBASIC17.9■□□□□ 0.46
AP3S2P59780 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.9■□□□□ 0.46
AP3S2P59780 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
AP3S2P59780 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
AP3S2P59780 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.89■□□□□ 0.46
AP3S2P59780 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
AP3S2P59780 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.89■□□□□ 0.46
AP3S2P59780 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
AP3S2P59780 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
AP3S2P59780 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.89■□□□□ 0.45
AP3S2P59780 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms