Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.37■□□□□ 0.53
DEFA3P59666 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.37■□□□□ 0.53
DEFA3P59666 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DEFA3P59666 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
DEFA3P59666 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DEFA3P59666 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DEFA3P59666 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DEFA3P59666 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DEFA3P59666 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
DEFA3P59666 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DEFA3P59666 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.36■□□□□ 0.53
DEFA3P59666 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.36■□□□□ 0.53
DEFA3P59666 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.36■□□□□ 0.53
DEFA3P59666 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.36■□□□□ 0.53
DEFA3P59666 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DEFA3P59666 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DEFA3P59666 AC009086.3-201ENST00000623486 1008 ntBASIC18.36■□□□□ 0.53
DEFA3P59666 AC116562.4-201ENST00000641316 2276 ntBASIC18.36■□□□□ 0.53
DEFA3P59666 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DEFA3P59666 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DEFA3P59666 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.35■□□□□ 0.53
DEFA3P59666 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DEFA3P59666 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DEFA3P59666 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.35■□□□□ 0.53
DEFA3P59666 AC026202.3-201ENST00000600805 1127 ntBASIC18.35■□□□□ 0.53
DEFA3P59666 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.35■□□□□ 0.53
DEFA3P59666 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.35■□□□□ 0.53
DEFA3P59666 AP000974.1-201ENST00000623909 2387 ntBASIC18.35■□□□□ 0.53
DEFA3P59666 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 AC004408.2-201ENST00000623613 2777 ntBASIC18.35■□□□□ 0.53
DEFA3P59666 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DEFA3P59666 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.34■□□□□ 0.53
DEFA3P59666 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
DEFA3P59666 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 AC060814.1-201ENST00000554326 538 ntBASIC18.34■□□□□ 0.53
DEFA3P59666 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DEFA3P59666 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.34■□□□□ 0.53
DEFA3P59666 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DEFA3P59666 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DEFA3P59666 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DEFA3P59666 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.33■□□□□ 0.53
DEFA3P59666 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.33■□□□□ 0.53
DEFA3P59666 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.33■□□□□ 0.53
DEFA3P59666 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.33■□□□□ 0.53
DEFA3P59666 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DEFA3P59666 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.33■□□□□ 0.52
DEFA3P59666 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DEFA3P59666 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.33■□□□□ 0.52
DEFA3P59666 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DEFA3P59666 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.32■□□□□ 0.52
DEFA3P59666 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DEFA3P59666 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.32■□□□□ 0.52
DEFA3P59666 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.32■□□□□ 0.52
DEFA3P59666 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DEFA3P59666 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
DEFA3P59666 AC020907.5-201ENST00000624372 1936 ntBASIC18.32■□□□□ 0.52
DEFA3P59666 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DEFA3P59666 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DEFA3P59666 RAP2CP1-202ENST00000605179 643 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms