Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.23■□□□□ 0.67
SMIM11AP58511 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.23■□□□□ 0.67
SMIM11AP58511 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.23■□□□□ 0.67
SMIM11AP58511 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.23■□□□□ 0.67
SMIM11AP58511 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.23■□□□□ 0.67
SMIM11AP58511 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMIM11AP58511 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.23■□□□□ 0.67
SMIM11AP58511 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMIM11AP58511 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
SMIM11AP58511 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SMIM11AP58511 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM11AP58511 PLK5-205ENST00000642079 1969 ntBASIC19.23■□□□□ 0.67
SMIM11AP58511 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SMIM11AP58511 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SMIM11AP58511 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SMIM11AP58511 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 BX842568.3-201ENST00000418104 571 ntBASIC19.22■□□□□ 0.67
SMIM11AP58511 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SMIM11AP58511 AL356441.2-201ENST00000443009 864 ntBASIC19.22■□□□□ 0.67
SMIM11AP58511 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.22■□□□□ 0.67
SMIM11AP58511 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 AP005212.1-201ENST00000581547 1997 ntBASIC19.22■□□□□ 0.67
SMIM11AP58511 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
SMIM11AP58511 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM11AP58511 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM11AP58511 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMIM11AP58511 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM11AP58511 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SMIM11AP58511 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SMIM11AP58511 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SMIM11AP58511 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM11AP58511 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.21■□□□□ 0.67
SMIM11AP58511 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.21■□□□□ 0.67
SMIM11AP58511 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SMIM11AP58511 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.21■□□□□ 0.67
SMIM11AP58511 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
SMIM11AP58511 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SMIM11AP58511 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.21■□□□□ 0.67
SMIM11AP58511 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM11AP58511 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
SMIM11AP58511 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.2■□□□□ 0.66
SMIM11AP58511 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SMIM11AP58511 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM11AP58511 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SMIM11AP58511 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM11AP58511 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SMIM11AP58511 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.2■□□□□ 0.66
SMIM11AP58511 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMIM11AP58511 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.2■□□□□ 0.66
SMIM11AP58511 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM11AP58511 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SMIM11AP58511 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.2■□□□□ 0.66
SMIM11AP58511 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMIM11AP58511 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.2■□□□□ 0.66
SMIM11AP58511 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMIM11AP58511 AC133561.4-201ENST00000566112 224 ntBASIC19.2■□□□□ 0.66
SMIM11AP58511 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM11AP58511 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SMIM11AP58511 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM11AP58511 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM11AP58511 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.2■□□□□ 0.66
SMIM11AP58511 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMIM11AP58511 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.19■□□□□ 0.66
SMIM11AP58511 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.19■□□□□ 0.66
SMIM11AP58511 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM11AP58511 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SMIM11AP58511 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms