Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKN2DP55273 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
CDKN2DP55273 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN2DP55273 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN2DP55273 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN2DP55273 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN2DP55273 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN2DP55273 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDKN2DP55273 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDKN2DP55273 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDKN2DP55273 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDKN2DP55273 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKN2DP55273 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKN2DP55273 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN2DP55273 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDKN2DP55273 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDKN2DP55273 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CDKN2DP55273 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDKN2DP55273 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDKN2DP55273 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2DP55273 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.64■□□□□ 0.89
CDKN2DP55273 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2DP55273 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.64■□□□□ 0.89
CDKN2DP55273 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CDKN2DP55273 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CDKN2DP55273 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2DP55273 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2DP55273 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2DP55273 AC006128.1-201ENST00000624704 1661 ntBASIC20.64■□□□□ 0.89
CDKN2DP55273 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2DP55273 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2DP55273 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.64■□□□□ 0.89
CDKN2DP55273 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2DP55273 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.63■□□□□ 0.89
CDKN2DP55273 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2DP55273 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2DP55273 LINC02228-203ENST00000641970 1355 ntBASIC20.63■□□□□ 0.89
CDKN2DP55273 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.63■□□□□ 0.89
CDKN2DP55273 PKD1P6-201ENST00000343738 4769 ntBASIC20.63■□□□□ 0.89
CDKN2DP55273 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDKN2DP55273 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.63■□□□□ 0.89
CDKN2DP55273 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 AC121338.2-201ENST00000622535 1744 ntBASIC20.62■□□□□ 0.89
CDKN2DP55273 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.62■□□□□ 0.89
CDKN2DP55273 ZNRF2P3-201ENST00000424200 374 ntBASIC20.62■□□□□ 0.89
CDKN2DP55273 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CDKN2DP55273 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDKN2DP55273 AP004607.4-201ENST00000530158 1459 ntBASIC20.62■□□□□ 0.89
CDKN2DP55273 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.62■□□□□ 0.89
CDKN2DP55273 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.62■□□□□ 0.89
CDKN2DP55273 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.62■□□□□ 0.89
CDKN2DP55273 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2DP55273 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKN2DP55273 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDKN2DP55273 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKN2DP55273 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKN2DP55273 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKN2DP55273 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKN2DP55273 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKN2DP55273 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKN2DP55273 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKN2DP55273 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2DP55273 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CDKN2DP55273 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms