Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.83■■□□□ 1.4
CENPFP49454 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
CENPFP49454 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.4
CENPFP49454 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CENPFP49454 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CENPFP49454 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CENPFP49454 POU5F1P4-201ENST00000413175 1085 ntBASIC23.82■■□□□ 1.4
CENPFP49454 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.82■■□□□ 1.4
CENPFP49454 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.82■■□□□ 1.4
CENPFP49454 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 LSM12P1-201ENST00000411836 588 ntBASIC23.82■■□□□ 1.4
CENPFP49454 POM121L13P-201ENST00000422362 380 ntBASIC23.82■■□□□ 1.4
CENPFP49454 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.82■■□□□ 1.4
CENPFP49454 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.82■■□□□ 1.4
CENPFP49454 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CENPFP49454 AC092865.7-201ENST00000641832 219 ntBASIC23.82■■□□□ 1.4
CENPFP49454 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CENPFP49454 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CENPFP49454 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CENPFP49454 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CENPFP49454 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC23.81■■□□□ 1.4
CENPFP49454 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CENPFP49454 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CENPFP49454 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.81■■□□□ 1.4
CENPFP49454 AC092068.2-201ENST00000590491 1708 ntBASIC23.81■■□□□ 1.4
CENPFP49454 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CENPFP49454 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.81■■□□□ 1.4
CENPFP49454 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CENPFP49454 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.8■■□□□ 1.4
CENPFP49454 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CENPFP49454 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CENPFP49454 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.8■■□□□ 1.4
CENPFP49454 AC145285.6-201ENST00000604632 637 ntBASIC23.8■■□□□ 1.4
CENPFP49454 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CENPFP49454 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CENPFP49454 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.8■■□□□ 1.4
CENPFP49454 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.8■■□□□ 1.4
CENPFP49454 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CENPFP49454 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.79■■□□□ 1.4
CENPFP49454 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.79■■□□□ 1.4
CENPFP49454 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CENPFP49454 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.79■■□□□ 1.4
CENPFP49454 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CENPFP49454 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.79■■□□□ 1.4
CENPFP49454 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CENPFP49454 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CENPFP49454 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CENPFP49454 C9orf163-202ENST00000624034 2573 ntBASIC23.79■■□□□ 1.4
CENPFP49454 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CENPFP49454 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CENPFP49454 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CENPFP49454 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CENPFP49454 KRT17P2-201ENST00000300992 1314 ntBASIC23.78■■□□□ 1.4
CENPFP49454 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.78■■□□□ 1.4
CENPFP49454 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.78■■□□□ 1.4
CENPFP49454 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CENPFP49454 OR7E47P-201ENST00000546390 1422 ntBASIC23.78■■□□□ 1.4
CENPFP49454 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CENPFP49454 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.78■■□□□ 1.4
CENPFP49454 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CENPFP49454 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.78■■□□□ 1.4
CENPFP49454 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.78■■□□□ 1.4
CENPFP49454 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CENPFP49454 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CENPFP49454 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CENPFP49454 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.78■■□□□ 1.4
CENPFP49454 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CENPFP49454 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CENPFP49454 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CENPFP49454 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.78■■□□□ 1.4
CENPFP49454 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CENPFP49454 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CENPFP49454 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CENPFP49454 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CENPFP49454 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
CENPFP49454 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CENPFP49454 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CENPFP49454 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CENPFP49454 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CENPFP49454 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.76■■□□□ 1.39
CENPFP49454 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.76■■□□□ 1.39
CENPFP49454 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
CENPFP49454 DHDH-203ENST00000522614 776 ntTSL 5 BASIC23.76■■□□□ 1.39
CENPFP49454 AL353708.3-201ENST00000610272 989 ntBASIC23.76■■□□□ 1.39
CENPFP49454 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CENPFP49454 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CENPFP49454 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CENPFP49454 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CENPFP49454 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CENPFP49454 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.76■■□□□ 1.39
CENPFP49454 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.76■■□□□ 1.39
CENPFP49454 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.76■■□□□ 1.39
CENPFP49454 MTDHP1-201ENST00000605323 784 ntBASIC23.76■■□□□ 1.39
CENPFP49454 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms