Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A2P43004 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC1A2P43004 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC1A2P43004 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC1A2P43004 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SLC1A2P43004 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC1A2P43004 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A2P43004 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A2P43004 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A2P43004 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC1A2P43004 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC1A2P43004 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SLC1A2P43004 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC1A2P43004 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC1A2P43004 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SLC1A2P43004 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC1A2P43004 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC1A2P43004 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC1A2P43004 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC1A2P43004 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLC1A2P43004 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC1A2P43004 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLC1A2P43004 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC1A2P43004 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.8■□□□□ 0.92
SLC1A2P43004 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC1A2P43004 AC006128.1-201ENST00000624704 1661 ntBASIC20.8■□□□□ 0.92
SLC1A2P43004 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A2P43004 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC1A2P43004 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A2P43004 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC1A2P43004 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SLC1A2P43004 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A2P43004 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC1A2P43004 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC1A2P43004 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC1A2P43004 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A2P43004 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A2P43004 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC1A2P43004 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC1A2P43004 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A2P43004 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC1A2P43004 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC1A2P43004 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC1A2P43004 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A2P43004 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.79■□□□□ 0.92
SLC1A2P43004 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC1A2P43004 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SLC1A2P43004 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A2P43004 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A2P43004 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SLC1A2P43004 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A2P43004 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC1A2P43004 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC1A2P43004 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SLC1A2P43004 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A2P43004 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC1A2P43004 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SLC1A2P43004 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A2P43004 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 AP004607.4-201ENST00000530158 1459 ntBASIC20.78■□□□□ 0.92
SLC1A2P43004 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC1A2P43004 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC1A2P43004 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC1A2P43004 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC1A2P43004 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SLC1A2P43004 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC1A2P43004 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SLC1A2P43004 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms