Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 AC006128.1-201ENST00000624704 1661 ntBASIC18.72■□□□□ 0.59
SDHAP31040 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SDHAP31040 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.71■□□□□ 0.59
SDHAP31040 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SDHAP31040 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.71■□□□□ 0.59
SDHAP31040 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.71■□□□□ 0.59
SDHAP31040 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.71■□□□□ 0.59
SDHAP31040 AC053503.5-201ENST00000601508 636 ntBASIC18.71■□□□□ 0.59
SDHAP31040 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.71■□□□□ 0.59
SDHAP31040 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.71■□□□□ 0.59
SDHAP31040 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.71■□□□□ 0.59
SDHAP31040 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SDHAP31040 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SDHAP31040 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.7■□□□□ 0.58
SDHAP31040 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SDHAP31040 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SDHAP31040 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.7■□□□□ 0.58
SDHAP31040 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.7■□□□□ 0.58
SDHAP31040 EEF1DP3-203ENST00000566025 782 ntBASIC18.7■□□□□ 0.58
SDHAP31040 TPRG1LP1-201ENST00000598702 760 ntBASIC18.7■□□□□ 0.58
SDHAP31040 AL358852.1-201ENST00000623174 1268 ntBASIC18.7■□□□□ 0.58
SDHAP31040 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.7■□□□□ 0.58
SDHAP31040 LINC01521-201ENST00000504184 1943 ntBASIC18.7■□□□□ 0.58
SDHAP31040 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 PLK5-205ENST00000642079 1969 ntBASIC18.7■□□□□ 0.58
SDHAP31040 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.7■□□□□ 0.58
SDHAP31040 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SDHAP31040 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SDHAP31040 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SDHAP31040 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.69■□□□□ 0.58
SDHAP31040 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SDHAP31040 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHAP31040 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHAP31040 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.69■□□□□ 0.58
SDHAP31040 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SDHAP31040 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.68■□□□□ 0.58
SDHAP31040 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SDHAP31040 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.68■□□□□ 0.58
SDHAP31040 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.68■□□□□ 0.58
SDHAP31040 AC142381.2-201ENST00000566120 298 ntBASIC18.68■□□□□ 0.58
SDHAP31040 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.68■□□□□ 0.58
SDHAP31040 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
SDHAP31040 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.68■□□□□ 0.58
SDHAP31040 FEM1AP1-201ENST00000431297 1995 ntBASIC18.68■□□□□ 0.58
SDHAP31040 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SDHAP31040 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SDHAP31040 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 AL121603.2-201ENST00000557373 2117 ntBASIC18.67■□□□□ 0.58
SDHAP31040 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 AC121338.2-201ENST00000622535 1744 ntBASIC18.67■□□□□ 0.58
SDHAP31040 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.67■□□□□ 0.58
SDHAP31040 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SDHAP31040 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms