Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.13■□□□□ 0.65
SHC1P29353 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.13■□□□□ 0.65
SHC1P29353 NTF6G-201ENST00000591094 616 ntBASIC19.13■□□□□ 0.65
SHC1P29353 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SHC1P29353 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 KRT87P-202ENST00000534226 1464 ntBASIC19.13■□□□□ 0.65
SHC1P29353 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.13■□□□□ 0.65
SHC1P29353 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHC1P29353 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.13■□□□□ 0.65
SHC1P29353 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC1P29353 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC1P29353 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.12■□□□□ 0.65
SHC1P29353 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC1P29353 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC1P29353 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC1P29353 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC1P29353 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC1P29353 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.12■□□□□ 0.65
SHC1P29353 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.12■□□□□ 0.65
SHC1P29353 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.12■□□□□ 0.65
SHC1P29353 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.12■□□□□ 0.65
SHC1P29353 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC1P29353 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC1P29353 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHC1P29353 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SHC1P29353 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC1P29353 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.11■□□□□ 0.65
SHC1P29353 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.11■□□□□ 0.65
SHC1P29353 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHC1P29353 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHC1P29353 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.11■□□□□ 0.65
SHC1P29353 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SHC1P29353 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC1P29353 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.1■□□□□ 0.65
SHC1P29353 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC1P29353 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC1P29353 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.1■□□□□ 0.65
SHC1P29353 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHC1P29353 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHC1P29353 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC1P29353 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC1P29353 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHC1P29353 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC1P29353 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC1P29353 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC1P29353 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC1P29353 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC1P29353 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SHC1P29353 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SHC1P29353 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.09■□□□□ 0.65
SHC1P29353 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC1P29353 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SHC1P29353 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.09■□□□□ 0.65
SHC1P29353 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.09■□□□□ 0.65
SHC1P29353 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.09■□□□□ 0.65
SHC1P29353 AC104187.1-201ENST00000607510 612 ntBASIC19.09■□□□□ 0.65
SHC1P29353 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC1P29353 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHC1P29353 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHC1P29353 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.08■□□□□ 0.65
SHC1P29353 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHC1P29353 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHC1P29353 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHC1P29353 AF106564.1-201ENST00000607058 2553 ntBASIC19.08■□□□□ 0.65
SHC1P29353 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHC1P29353 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHC1P29353 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
SHC1P29353 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.08■□□□□ 0.64
SHC1P29353 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.08■□□□□ 0.64
SHC1P29353 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.08■□□□□ 0.64
SHC1P29353 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.08■□□□□ 0.64
SHC1P29353 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 EEF1DP3-203ENST00000566025 782 ntBASIC19.08■□□□□ 0.64
SHC1P29353 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.08■□□□□ 0.64
SHC1P29353 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.08■□□□□ 0.64
SHC1P29353 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.08■□□□□ 0.64
SHC1P29353 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.08■□□□□ 0.64
SHC1P29353 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHC1P29353 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHC1P29353 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms