Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.02■□□□□ 0.64
FREM3P0C091 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.02■□□□□ 0.64
FREM3P0C091 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.02■□□□□ 0.64
FREM3P0C091 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.02■□□□□ 0.64
FREM3P0C091 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.02■□□□□ 0.64
FREM3P0C091 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.02■□□□□ 0.64
FREM3P0C091 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
FREM3P0C091 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.02■□□□□ 0.64
FREM3P0C091 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
FREM3P0C091 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FREM3P0C091 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FREM3P0C091 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FREM3P0C091 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.02■□□□□ 0.63
FREM3P0C091 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.02■□□□□ 0.63
FREM3P0C091 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
FREM3P0C091 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
FREM3P0C091 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
FREM3P0C091 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
FREM3P0C091 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.01■□□□□ 0.63
FREM3P0C091 HLA-L-209ENST00000420110 1011 ntBASIC19.01■□□□□ 0.63
FREM3P0C091 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.01■□□□□ 0.63
FREM3P0C091 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 AC104771.1-201ENST00000603335 964 ntBASIC19.01■□□□□ 0.63
FREM3P0C091 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.01■□□□□ 0.63
FREM3P0C091 RBM17P2-201ENST00000616397 1405 ntBASIC19.01■□□□□ 0.63
FREM3P0C091 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.01■□□□□ 0.63
FREM3P0C091 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 AC006970.2-201ENST00000450065 779 ntBASIC19.01■□□□□ 0.63
FREM3P0C091 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
FREM3P0C091 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.01■□□□□ 0.63
FREM3P0C091 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
FREM3P0C091 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
FREM3P0C091 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 GPX1P1-201ENST00000388829 606 ntBASIC19■□□□□ 0.63
FREM3P0C091 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
FREM3P0C091 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
FREM3P0C091 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19■□□□□ 0.63
FREM3P0C091 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
FREM3P0C091 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19■□□□□ 0.63
FREM3P0C091 AC007322.1-201ENST00000426983 750 ntBASIC19■□□□□ 0.63
FREM3P0C091 GUSBP6-202ENST00000438529 1198 ntBASIC19■□□□□ 0.63
FREM3P0C091 AC098934.4-201ENST00000564127 592 ntBASIC19■□□□□ 0.63
FREM3P0C091 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19■□□□□ 0.63
FREM3P0C091 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.99■□□□□ 0.63
FREM3P0C091 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FREM3P0C091 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
FREM3P0C091 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
FREM3P0C091 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.99■□□□□ 0.63
FREM3P0C091 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FREM3P0C091 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
FREM3P0C091 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.99■□□□□ 0.63
FREM3P0C091 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
FREM3P0C091 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
FREM3P0C091 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FREM3P0C091 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.99■□□□□ 0.63
FREM3P0C091 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FREM3P0C091 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FREM3P0C091 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FREM3P0C091 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FREM3P0C091 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.98■□□□□ 0.63
FREM3P0C091 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.98■□□□□ 0.63
FREM3P0C091 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.98■□□□□ 0.63
FREM3P0C091 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms