Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSBP07858 AL355802.2-201ENST00000402069 882 ntBASIC19.91■□□□□ 0.78
CTSBP07858 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSBP07858 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSBP07858 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CTSBP07858 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSBP07858 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSBP07858 AL121832.2-201ENST00000610979 668 ntBASIC19.91■□□□□ 0.78
CTSBP07858 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSBP07858 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.91■□□□□ 0.78
CTSBP07858 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CTSBP07858 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSBP07858 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSBP07858 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSBP07858 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSBP07858 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSBP07858 TSPY6P-201ENST00000448518 926 ntBASIC19.9■□□□□ 0.78
CTSBP07858 AC093787.1-201ENST00000450396 207 ntBASIC19.9■□□□□ 0.78
CTSBP07858 AC007322.4-201ENST00000509611 723 ntBASIC19.9■□□□□ 0.78
CTSBP07858 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CTSBP07858 AC016405.3-201ENST00000607710 860 ntBASIC19.9■□□□□ 0.78
CTSBP07858 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSBP07858 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSBP07858 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
CTSBP07858 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSBP07858 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CTSBP07858 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CTSBP07858 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CTSBP07858 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSBP07858 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSBP07858 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSBP07858 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSBP07858 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSBP07858 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSBP07858 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CTSBP07858 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CTSBP07858 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.89■□□□□ 0.77
CTSBP07858 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.89■□□□□ 0.77
CTSBP07858 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.89■□□□□ 0.77
CTSBP07858 AL138781.1-201ENST00000566567 1274 ntBASIC19.89■□□□□ 0.77
CTSBP07858 AC105036.2-201ENST00000569468 176 ntBASIC19.89■□□□□ 0.77
CTSBP07858 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.89■□□□□ 0.77
CTSBP07858 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.89■□□□□ 0.77
CTSBP07858 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.89■□□□□ 0.77
CTSBP07858 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.89■□□□□ 0.77
CTSBP07858 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.88■□□□□ 0.77
CTSBP07858 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CTSBP07858 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.88■□□□□ 0.77
CTSBP07858 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CTSBP07858 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CTSBP07858 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CTSBP07858 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CTSBP07858 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSBP07858 LINC00565-201ENST00000562710 2331 ntBASIC19.87■□□□□ 0.77
CTSBP07858 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSBP07858 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTSBP07858 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTSBP07858 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CTSBP07858 AC098934.4-201ENST00000564127 592 ntBASIC19.87■□□□□ 0.77
CTSBP07858 AC243732.1-201ENST00000612648 864 ntBASIC19.87■□□□□ 0.77
CTSBP07858 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSBP07858 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSBP07858 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CTSBP07858 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CTSBP07858 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSBP07858 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSBP07858 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.87■□□□□ 0.77
CTSBP07858 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CTSBP07858 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.86■□□□□ 0.77
CTSBP07858 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CTSBP07858 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.86■□□□□ 0.77
CTSBP07858 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 AC091799.1-201ENST00000422823 811 ntBASIC19.86■□□□□ 0.77
CTSBP07858 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.86■□□□□ 0.77
CTSBP07858 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.86■□□□□ 0.77
CTSBP07858 AF201337.1-201ENST00000520239 748 ntBASIC19.86■□□□□ 0.77
CTSBP07858 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.86■□□□□ 0.77
CTSBP07858 AC133552.2-202ENST00000575694 574 ntBASIC19.86■□□□□ 0.77
CTSBP07858 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.86■□□□□ 0.77
CTSBP07858 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.86■□□□□ 0.77
CTSBP07858 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTSBP07858 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms