Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DPB1P04440 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 AP005212.1-201ENST00000581547 1997 ntBASIC18.72■□□□□ 0.59
HLA-DPB1P04440 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DPB1P04440 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 AC106739.1-201ENST00000617035 715 ntBASIC18.71■□□□□ 0.59
HLA-DPB1P04440 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DPB1P04440 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HLA-DPB1P04440 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 SLC47A1P1-202ENST00000449666 945 ntBASIC18.7■□□□□ 0.58
HLA-DPB1P04440 OR2I1P-207ENST00000453522 948 ntBASIC18.7■□□□□ 0.58
HLA-DPB1P04440 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DPB1P04440 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 AL139246.5-201ENST00000606645 996 ntBASIC18.69■□□□□ 0.58
HLA-DPB1P04440 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DPB1P04440 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DPB1P04440 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms