Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21■□□□□ 0.95
TRBC1P01850 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21■□□□□ 0.95
TRBC1P01850 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21■□□□□ 0.95
TRBC1P01850 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21■□□□□ 0.95
TRBC1P01850 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBC1P01850 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21■□□□□ 0.95
TRBC1P01850 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBC1P01850 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRBC1P01850 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBC1P01850 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBC1P01850 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRBC1P01850 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBC1P01850 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.99■□□□□ 0.95
TRBC1P01850 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBC1P01850 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.99■□□□□ 0.95
TRBC1P01850 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBC1P01850 AC011767.1-201ENST00000617410 1153 ntBASIC20.99■□□□□ 0.95
TRBC1P01850 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBC1P01850 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBC1P01850 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TRBC1P01850 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBC1P01850 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBC1P01850 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBC1P01850 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBC1P01850 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.98■□□□□ 0.95
TRBC1P01850 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBC1P01850 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBC1P01850 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.97■□□□□ 0.95
TRBC1P01850 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBC1P01850 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBC1P01850 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBC1P01850 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
TRBC1P01850 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.97■□□□□ 0.95
TRBC1P01850 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRBC1P01850 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TRBC1P01850 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBC1P01850 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBC1P01850 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TRBC1P01850 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBC1P01850 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBC1P01850 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.96■□□□□ 0.95
TRBC1P01850 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBC1P01850 AC010536.3-201ENST00000620306 533 ntBASIC20.96■□□□□ 0.95
TRBC1P01850 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBC1P01850 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBC1P01850 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
TRBC1P01850 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBC1P01850 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRBC1P01850 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRBC1P01850 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.95■□□□□ 0.94
TRBC1P01850 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
TRBC1P01850 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.95■□□□□ 0.94
TRBC1P01850 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.95■□□□□ 0.94
TRBC1P01850 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRBC1P01850 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.95■□□□□ 0.94
TRBC1P01850 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.95■□□□□ 0.94
TRBC1P01850 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBC1P01850 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.95■□□□□ 0.94
TRBC1P01850 RBM17P2-201ENST00000616397 1405 ntBASIC20.95■□□□□ 0.94
TRBC1P01850 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRBC1P01850 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBC1P01850 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBC1P01850 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBC1P01850 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBC1P01850 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms